Quick usage 🦅

• Complete Biological Systems Prediction Workflow
  • Pansystems Workflow
  • Command Line Usage
  • Key Arguments
  • Output Structure
  • When to Use Pansystems vs Individual Commands
  • Integration Notes
• Pangenome Comparison Analysis
  • Compare spots across pangenomes
  • Compare systems across pangenomes
  • GFRR Metrics Overview
  • Output Summary
  • Prerequisites